rs17496232 chr2:216619506 T>C
- Sequence
ttctttgctacctccaccccgcaa[T/C]ggctgtttccaaattggattattt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- ERG_HUMAN IKZF1_HUMAN MEF2B_HUMAN RUNX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERG_HUMAN | -2.92 | 2.81 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.43 | 1.72 | 1.33 | n/a | n/a | |||
| MEF2B_HUMAN | -2.06 | 2.33 | 1.00 | n/a | No Hit | |||
| RUNX2_HUMAN | n/a | 2.19 | 1.00 | n/a | No Hit |
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