rs17497502 chr12:27336479 A>G

Sequence
atgttctctgtagtagcgtgtagt[A/G]tttctagatatttactgataattt
ASB in cell types
LHSAR (prostate epithelial cells)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.34 1.89 1.008.3·10-5 1.50 4.20 Concordant
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Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

GRASP chronic kidney disease,  diastolic blood pressure (dbp),  hdl cholesterol change with statins,  systolic blood pressure (sbp),  triglycerides
GTEx eQTL Brain_Cerebellar_Hemisphere,  Esophagus_Mucosa,  Skin_Sun_Exposed_Lower_leg

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