rs17497942 chr2:222521235 C>G

Sequence
acttttgtggttaaaatttgaaaa[C/G]aagtgctgcctggtttgagtatta
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RUNX3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RUNX3_HUMAN 2.83 -2.70 1.9·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) hdl cholesterol ldl cholesterol ldl cholesterol change with statins total cholesterol
GTEx eQTL Brain_Cerebellum Brain_Frontal_Cortex_BA9 Brain_Putamen_basal_ganglia Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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