rs17498524 chr7:7911591 T>C

Sequence
acatagcttaatggtttatgtcag[T/C]gtgttactatagctatttgctggc
ASB in cell types
SK-N-SH (neuroblastoma) T47D (invasive ductal carcinoma)
ASB for transcription factors
GATA3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN 2.74 1.27 0.865.6·10-3 1.12 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  advanced age-related macular degeneration (geographic atrophy),  ldl cholesterol,  simpson-angus scale,  total cholesterol
GTEx eQTL Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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