rs17499173 chr12:116318259 C>T
- Sequence
tctcacgcgtgcggcaagcggctg[C/T]cgtgtttaccgaccgtcctgtgac
- ASB in cell types
- WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- BHE40_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 3.20 | -3.19 | 1.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.73 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, hdl cholesterol, ldl cholesterol, neuroblastoma (brain cancer), triglycerides change with statins