rs17501134 chr4:38857894 C>T
- Sequence
cagaaagcagcaggtatctgtgac[C/T]ctggaaaaccagatttgtgaaaca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes macrophages germinal center B-cells
- ASB for transcription factors
- STAT1_HUMAN IKZF2_HUMAN ZNF24_HUMAN CBP_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.14 | -0.48 | 1.67 | n/a | No Hit | |||
| IKZF2_HUMAN | 0.86 | -0.81 | 1.00 | n/a | n/a | |||
| ZNF24_HUMAN | 2.63 | -2.67 | 1.00 | n/a | No Hit | |||
| CBP_HUMAN | 1.53 | -0.94 | 2.00 | n/a | n/a |
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