rs17504647 chr18:53380318 A>C
- Sequence
cttacatactggtagaaaaccctc[A/C]ttctctcttgctcccaattcacac
- ASB in cell types
- epithelial cell of prostate GM19239 (male B-cells lymphoblastoid cell line) GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.29 | 1.96 | 1.81 | n/a | No Hit | |||
| STAG1_HUMAN | -1.26 | 0.96 | 1.33 | n/a | n/a |
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