ADASTRA v6.1.0
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rs175133
chr11:61092319
C
>
T
Sequence
acctggtgtggcccacggcagcac[C/T]ggcaggcacctctccggtagaggt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
0.93
0.27
3.4·10
-4
1.00
1.15
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
college completion
,
hdl cholesterol
,
obesity with early age of onset (age >2)
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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