rs1755345 chr1:16726023 T>C
- Sequence
gattctaaatctgcatctggaact[T/C]gtagagtcaataatctgaaaccac
- ASB in cell types
- HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma) RWPE1 (prostate epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN GCR_HUMAN ZFX_HUMAN ZN768_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.04 | 1.74 | 2.21 | n/a | No Hit | |||
| GCR_HUMAN | 0.06 | 2.57 | 2.00 | n/a | No Hit | |||
| ZFX_HUMAN | -0.03 | 2.28 | 1.67 | n/a | No Hit | |||
| ZN768_HUMAN | n/a | 2.94 | 2.00 | n/a | No Hit |
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