rs1789094 chr18:77134229 C>T
- Sequence
tttcctccccaaaatatctcttgg[C/T]tttatctcagtgactccacagggc
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts GM19099 (female B-cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- GATA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | 1.26 | -2.75 | 1.50 | 0.08 | Weak Discordant |
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Motif analysis
