rs1791645 chr12:52349484 A>T

Sequence
agtgcttttgttcatttgcttctg[A/T]tatgctttcttaagcggggtgaag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) -0.51 1.68 1.002.9·10-4 1.05
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  aortic valve calcium,  fasting blood glucose,  height,  ldl cholesterol,  mitral annular calcium,  systolic blood pressure (sbp),  waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid

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