rs1791657 chr12:52380586 G>A

Sequence
ctgcagcctccaacttggcacgct[G/A]cagggaaggcagtttgcaggtagg
ASB in cell types
foreskin keratinocyte MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.06 0.89 0.900.05 1.74 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP infant head circumference,  tetrology of fallot,  total cholesterol change with statins,  triglycerides change with statins
GTEx eQTL Lung,  Thyroid

Download