rs1792936 chr11:62133434 G>C

Sequence
cctgcctcctggcctggtgcgcac[G/C]tgcctgcggggcccatcgggcagc
ASB for transcription factors
ZIC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZIC2_HUMAN 2.42 -2.26 0.031.00 1.00 1.80 Weak Discordant
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Motif analysis

ZIC2_HUMAN Weak Discordant
ZIC2_HUMAN pic

Genetic associations

GTEx eQTL Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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