rs1795060 chr1:214236678 C>T

Sequence
ggaaactgaatcctagtgagatta[C/T]gcaacttggctaattagtaagtga
ASB in cell types
THP-1 (acute monocytic leukemia)
ASB for transcription factors
CEBPA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPA_HUMAN 1.83 -1.64 0.021.00 1.00 -0.23 Weak Concordant
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Motif analysis

CEBPA_HUMAN Weak Concordant
CEBPA_HUMAN pic

Genetic associations

GRASP microalbuminuria,  obesity with early age of onset (age >2),  rheumatoid arthritis
GTEx eQTL Brain_Cerebellum,  Thyroid

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