rs1795330 chr3:41533242 T>C
- Sequence
aaagcacacaacagtgagcaaata[T/C]gtgttattttaagtcgcttagctt
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.22 | -0.10 | 1.42 | -0.72 | Weak Concordant | |||
| ANDR_HUMAN | 0.96 | 1.48 | 1.54 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
