rs1795872 chr12:104550111 T>C
- Sequence
aaaactagaggcaccccttgtggc[T/C]gtgccgagttgatgtccagaagaa
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.51 | 1.89 | 1.32 | 1.13 | Weak Concordant |
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Motif analysis
