rs1796812 chr1:75936146 G>C

Sequence
gctaaacactttctccagaaatgg[G/C]atttataggtaagtcatacatgag
ASB for transcription factors
PKNX1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -2.34 2.29 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP bipolar disorder,  major depressive disorder,  neuroticism,  refractive error,  serum creatinine
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Colon_Sigmoid,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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