rs1797688 chr12:64651034 G>T

Sequence
aagatctgtttgctgtgtgtgctt[G/T]gctgcatttgatataaatagattt
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
FEZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FEZF1_HUMAN 2.07 n/a 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  comorbid depressive syndrome and alcohol dependence,  partial epilepsy,  resistance to kuru in aged women despite likely exposure
GTEx eQTL Esophagus_Muscularis,  Whole_Blood

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