rs1798078 chr12:71201343 A>T

Sequence
gttcaagggccaactgtaattaca[A/T]ccacaaaataaaagattaagtaca
ASB in cell types
HUES64 (embryonic stem cells)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN -0.48 2.62 1.003.6·10-3 1.42 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight
GTEx eQTL Colon_Transverse,  Muscle_Skeletal,  Nerve_Tibial

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