ADASTRA v6.1.0
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rs179871
chr7:106378048
A
>
G
Sequence
ttggaggttggctgactgtgtggg[A/G]tgtagtcccttcctcagggtgctc
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
GCR_HUMAN
JUN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN
-0.69
3.09
0.91
3.1·10
-4
2.00
n/a
No Hit
JUN_HUMAN
-1.01
2.58
1.00
3.3·10
-3
2.00
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
college completion
,
serum creatinine
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)