rs18 chr7:11557848 A>G
- Sequence
tcagttccctacttggccttctct[A/G]acaccacctagtgggagtgttgag
- ASB in cell types
- foreskin keratinocyte CTV-1 (Adult T acute lymphoblastic leukemia) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.71 | 1.06 | 1.40 | -0.32 | Weak Discordant | |||
| SPI1_HUMAN | 0.56 | 1.69 | 1.46 | n/a | No Hit |
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Motif analysis
