rs1800813 chr4:54228300 G>A
- Sequence
ctggcctctcgccttgggcgcagg[G/A]tttggggctcagctgtcaattcca
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) GM18951 (B-cells Lymphoblastoid Cell Lines) HUVEC-C (HUVEC, umbilical vein endothelial cells) A549 (lung carcinoma)
- ASB for transcription factors
- STAG1_HUMAN TF65_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.08 | 0.28 | 1.03 | n/a | n/a | |||
| TF65_HUMAN | 2.65 | -0.31 | 1.75 | n/a | No Hit | |||
| RAD21_HUMAN | 0.82 | 0.67 | 1.29 | n/a | n/a |
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