rs1800872 chr1:206773062 T>G
- Sequence
tttccagagactggcttcctacag[T/G]acaggcggggtcacaggatgtgtt
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.93 | 2.03 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
ClinVar graft-versus-host disease, resistance to, human immunodeficiency virus type 1, susceptibility to