rs1802539 chr8:102863955 G>A
- Sequence
acttgggggtaaaagcgcggcacc[G/A]acaccagctgtgtgcagcagtggc
- ASB in cell types
- breast tumor HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN362_HUMAN ANDR_HUMAN SKIL_HUMAN TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN362_HUMAN | 2.98 | n/a | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.90 | -0.25 | 2.00 | n/a | No Hit | |||
| SKIL_HUMAN | 2.49 | -2.03 | 1.00 | n/a | n/a | |||
| TYY1_HUMAN | -0.33 | 1.19 | 1.40 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Uterus, Whole_Blood