rs180351 chr11:116736925 C>T

Sequence
tccctctggtgtcagcctctggca[C/T]aggttgtcacgcttggttctgctg
ASB in cell types
GM23338 bipolar neuron GM12878 (female B-cells lymphoblastoid cell line) GM02610 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.20 2.10 1.001.3·10-32 1.18 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose microalbuminuria total cholesterol total cholesterol change with statins triglycerides triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cortex Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Uterus Whole_Blood

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