rs1805797 chr8:89981655 C>T
- Sequence
cacggcagacaacaattactgctt[C/T]ggttgccttgagaggaagatcact
- ASB in cell types
- CD14+ monocytes
- ASB for transcription factors
- NFAC3_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFAC3_HUMAN | -3.38 | 3.23 | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.37 | -0.32 | 3.00 | -2.34 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Cortex, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen, Testis, Thyroid, Whole_Blood