rs1806689 chr12:45544084 A>C

Sequence
ccagtgctctaggagaattgcctg[A/C]gtaataacaagttcaataattgat
ASB in cell types
THP-1 (acute monocytic leukemia) GM10847 (female B-cells Lymphoblastoid Cell Lines) spleen
ASB for transcription factors
RAD21_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 0.48 1.24 0.762.2·10-4 1.73 n/a n/a
CTCF_HUMAN 0.78 0.72 0.431.4·10-3 1.28 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2),  sporadic creutzfeldt-jakob disease

Download