rs1808573 chr11:44556690 C>G
- Sequence
tacagacagggtttcaccatgttg[C/G]ccaggctggtcttgaactcctgac
- ASB in cell types
- bipolar neuron HCT-116 (colon carcinoma) IPSC-derived bipolar neuron GM23338
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.87 | 0.70 | 1.18 | n/a | No Hit | |||
| RAD21_HUMAN | 2.87 | -1.09 | 1.08 | n/a | n/a |
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