rs1808574 chr11:44556737 A>G
- Sequence
acctcaggtgatctgcccgcctca[A/G]cctcgcaaaatgctggggttacag
- ASB in cell types
- HCT-116 (colon carcinoma) neural progenitors bipolar neuron neural cell
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.10 | 0.69 | 1.21 | n/a | No Hit | |||
| RAD21_HUMAN | 1.22 | -0.68 | 1.30 | n/a | n/a | |||
| SMC3_HUMAN | 1.69 | -1.48 | 1.00 | n/a | n/a |
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