rs1810202 chr1:41783533 C>T
- Sequence
gctcgcagggtgatgggagggatg[C/T]gggcaacctcacagctaccagggc
- ASB in cell types
- HEK293 (embryonic kidney) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ETS1_HUMAN SMCA4_HUMAN EGR2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETS1_HUMAN | -2.58 | 2.97 | 1.00 | 1.30 | Weak Concordant | |||
| SMCA4_HUMAN | 0.09 | 2.06 | 1.00 | n/a | n/a | |||
| EGR2_HUMAN | n/a | 1.91 | 2.00 | n/a | No Hit |
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Motif analysis
