ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs181399
chr22:17742552
C
>
T
Sequence
ctcaagcacctgatctaagacagg[C/T]gggaggcagaaggctgggtcagct
ASB in cell types
hepatocytes
neural progenitors
K562 (myelogenous leukemia)
smooth muscle cell
ASB for transcription factors
EP400_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP400_HUMAN
2.56
n/a
0.03
1.00
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol change with statins
GTEx eQTL
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)