rs1818599 chr3:188037231 G>A
- Sequence
tgagagcacacataggaggaaagc[G/A]aagggaagactgttggcaagtcag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) ZR-75-1 (invasive ductal carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN SUZ12_HUMAN GATA3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.17 | 1.36 | 1.63 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.30 | 1.12 | 1.79 | n/a | No Hit | |||
| SUZ12_HUMAN | n/a | 2.59 | 1.00 | n/a | n/a | |||
| GATA3_HUMAN | -0.60 | 1.39 | 1.60 | n/a | No Hit |
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