rs1820962 chr7:84824420 T>C
- Sequence
cacccatcagctccatgacatttc[T/C]aagaacactcatatttggtgtaaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NR2C1_HUMAN HDAC1_HUMAN KDM1A_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | -3.79 | 2.97 | 1.75 | n/a | No Hit | |||
| HDAC1_HUMAN | -1.31 | 2.56 | 1.00 | n/a | n/a | |||
| KDM1A_HUMAN | -0.16 | 2.09 | 1.00 | n/a | n/a | |||
| COT1_HUMAN | -3.54 | 2.50 | 1.50 | n/a | No Hit | |||
| NCOR1_HUMAN | -1.44 | 1.70 | 1.25 | n/a | n/a |
Items per page:
1 – 5 of 6