rs1822228 chr7:52592885 T>C
- Sequence
ttagtcccttcttatcctagcaag[T/C]ttaagacccctagtggatgcctga
- ASB in cell types
- HUES64 (embryonic stem cells)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -1.17 | 1.80 | 1.11 | n/a | n/a | |||
| CTCF_HUMAN | -0.16 | 1.38 | 1.27 | 0.69 | Weak Concordant |
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Motif analysis
