rs1822618 chr2:55050946 G>C
- Sequence
actgagagtggaaactttcctccc[G/C]ggaaaggaagaaacccgactggag
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) monocytes from periferal blood monocyte-derived macrophages from peripheral blood adult erythroblasts
- ASB for transcription factors
- TCF21_HUMAN SPI1_HUMAN SRBP2_HUMAN PAX8_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 3.05 | n/a | 3.00 | n/a | No Hit | |||
| SPI1_HUMAN | 2.29 | 0.58 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.81 | n/a | 3.00 | n/a | No Hit | |||
| PAX8_HUMAN | -2.76 | 2.85 | 1.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 1.94 | -1.71 | 1.00 | n/a | n/a |
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