rs1824056 chr3:157494855 T>G

Sequence
tgctcttgtttactgatgctgtta[T/G]gctgctctgcaggtctgcttttcc
ASB in cell types
T47D (invasive ductal carcinoma)
ASB for transcription factors
MNT_HUMAN CREB1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN -1.93 2.29 1.004.5·10-3 1.00 n/a No Hit
CREB1_HUMAN 1.51 -0.74 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adrenal_Gland,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Skin_Sun_Exposed_Lower_leg

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