rs1828170 chr5:98769731 G>T
- Sequence
tgtttaggtctccatccacctgtg[G/T]ggtataaatctgccagcctcaagg
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | -1.74 | 2.53 | 2.00 | 0.44 | Weak Concordant |
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Motif analysis
