rs1828485 chr2:195168576 C>T
- Sequence
tgttgtttccttttaagaaattgc[C/T]acagccacttcagtcttcagcaac
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SMCA4_HUMAN ETS1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 2.00 | -0.47 | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | 2.79 | -2.11 | 1.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.81 | -0.74 | 1.00 | n/a | No Hit |
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