rs183088432 chr11:65422759 C>A
- Sequence
tgagcaatgaccccggtgacgcgg[C/A]tgagggctataaaagcaaaagttg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- ELF1_HUMAN GATA3_HUMAN P66B_HUMAN ZBT7B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 3.06 | -5.00 | 1.50 | 3.83 | Discordant | |||
| GATA3_HUMAN | 2.72 | -0.10 | 1.75 | n/a | No Hit | |||
| P66B_HUMAN | 2.62 | -4.62 | 1.50 | n/a | n/a | |||
| ZBT7B_HUMAN | 2.72 | -4.79 | 1.50 | n/a | No Hit |
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Motif analysis
