rs1832667 chr3:195271310 G>C
- Sequence
tccggcgcccggcgttgggagggg[G/C]ggattccggactccagcgtgctga
- ASB in cell types
- HepG2 (hepatoblastoma) neural cell
- ASB for transcription factors
- SP130_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP130_HUMAN | -2.02 | 2.46 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.24 | 1.03 | 1.32 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Muscle_Skeletal