rs1836210 chr2:8685867 C>T

Sequence
cgcagccgaggcgcagcagcccct[C/T]tcggaggcgacttcccgcggcgcc
ASB in cell types
adult erythroblasts THP-1 (acute monocytic leukemia) MDA-MB-231 (breast adenocarcinoma)
ASB for transcription factors
KDM6A_HUMAN JUN_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM6A_HUMAN n/a 2.56 1.007.4·10-3 2.50 n/a n/a
JUN_HUMAN 1.45 0.20 0.011.00 1.88 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse

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