rs1840570 chr11:107017633 A>G
- Sequence
ctggaaccctaggccgtgcagggt[A/G]aggccgggccgccccccagcggtc
- ASB in cell types
- THP-1 (acute monocytic leukemia) SEM (childhood B acute lymphoblastic leukemia) GM18505 (female B-cells Lymphoblastoid Cell Lines) neural cell
- ASB for transcription factors
- ERG_HUMAN RAD21_HUMAN STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERG_HUMAN | -4.61 | 3.22 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | 1.16 | 0.57 | 1.17 | n/a | n/a | |||
| STAG1_HUMAN | 0.29 | 1.30 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.63 | 1.12 | 1.21 | n/a | No Hit |
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