rs1842354 chr8:62572826 C>T

Sequence
tctcccactaggttcctccaacaa[C/T]gtgggaattatgggagctacaaga
ASB in cell types
iPSC (induced pluripotent stem cells)
ASB for transcription factors
DUX4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN 2.65 n/a 4.7·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP lung function, ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc)
GTEx eQTL Adipose_Subcutaneous,  Esophagus_Muscularis,  Lung,  Nerve_Tibial

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