rs1842487 chr4:9595640 C>T
- Sequence
gggagtaggtacaaagatcacatg[C/T]ttcaaagggcaaaaagcagaacta
- ASB in cell types
- K562 (myelogenous leukemia) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- SOX6_HUMAN MITF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX6_HUMAN | -2.21 | 3.00 | 2.00 | n/a | No Hit | |||
| MITF_HUMAN | n/a | 2.76 | 2.00 | 0.08 | Weak Concordant |
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Motif analysis
