rs1843221 chr2:88773861 G>T
- Sequence
ggtatatatttcagatctattcag[G/T]ttgacacaatttggtcatctttga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) iPSC derived cardiomyocytes
- ASB for transcription factors
- P53_HUMAN LMNA_HUMAN CTCF_HUMAN EZH2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P53_HUMAN | 3.36 | -3.35 | 1.00 | n/a | No Hit | |||
| LMNA_HUMAN | 2.69 | -0.82 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.95 | -0.44 | 1.62 | n/a | No Hit | |||
| EZH2_HUMAN | 1.65 | -1.91 | 1.00 | n/a | n/a |
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