rs1843792 chr11:19519496 C>T

Sequence
gctcaaggccacagagctcggaga[C/T]ggtagagccagggtttgaaccctg
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines)
ASB for transcription factors
RAD21_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 2.07 -1.50 0.041.00 1.00 n/a n/a
STAG1_HUMAN 0.94 1.58 1.000.04 1.10 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  homa-b,  homa-ir,  total cholesterol

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