rs1845066 chr9:62802625 T>A
- Sequence
ggcctcccagagagtcccgccgtc[T/A]ccggcggccaggcctggctcagga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) OCI-LY1 (diffuse large B-cell lymphoma) MM1.S (plasma cell myeloma) H9
- ASB for transcription factors
- KDM2B_HUMAN CTCF_HUMAN BRD4_HUMAN REL_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM2B_HUMAN | 3.60 | -3.60 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.88 | -0.62 | 1.64 | n/a | No Hit | |||
| BRD4_HUMAN | 3.19 | n/a | 1.00 | n/a | n/a | |||
| REL_HUMAN | 3.19 | n/a | 1.00 | n/a | No Hit | |||
| MBD4_HUMAN | 3.05 | n/a | 1.00 | n/a | n/a |
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Motif analysis
