rs1848044 chr11:110778547 T>C

Sequence
aggcctggttctaagtgctgagaa[T/C]gaggaagtgagcaagatagtcagg
ASB in cell types
monocyte-derived dendritic cells MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.10 -0.63 1.5·10-61.00 1.57 -2.66 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP barnes akathisia rating scale,  crohns disease, combined control dataset, gender differentiated,  irritible bowel syndrome,  lp-pla2 activity
GTEx eQTL Adipose_Visceral_Omentum,  Adrenal_Gland,  Muscle_Skeletal,  Nerve_Tibial,  Thyroid

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