rs184953 chr7:116671876 A>C
- Sequence
gtgccaggagggtgcgcgccctgc[A/C]tctgagcccggggtgacactcgcc
- ASB in cell types
- thoracic aorta SK-N-SH (neuroblastoma) GM12878 (female B-cells lymphoblastoid cell line) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.70 | 1.18 | 1.42 | n/a | No Hit | |||
| STAG1_HUMAN | 0.93 | 0.24 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 0.32 | 2.94 | 2.00 | n/a | No Hit |
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