rs1850512 chr17:29294331 C>T
- Sequence
ctgtgcaacctcacagggccgggc[C/T]ttcaacgtcagcactatggctctc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) thymus-derived CD34- cells breast tumor HepG2 (hepatoblastoma)
- ASB for transcription factors
- PKNX1_HUMAN BC11B_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 0.43 | 0.10 | 1.17 | n/a | No Hit | |||
| BC11B_HUMAN | 2.73 | -0.24 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.15 | 0.19 | 1.67 | n/a | No Hit |
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